Logistic regression | |||
---|---|---|---|
MDR testing accuracy | Maximized accuracy | Nagelkerke R2 | Factors |
Before undertaking genetic analyses | |||
82.6% | 84.3% | 0.652 | Number of DR 3 alleles |
85.7% | 85.7% | 0.683 | Number of DR 3 alleles, sex, smoked |
Using results from first round of genetic analyses | |||
86.5% | 86.4% | 0.705 | Number of DR 3 alleles, sex, smoked, SNP11_389, SNP18_269 |
Using results from second round of genetic analyses | |||
88.4% | 88.5% | 0.715 | Number of DR 3 alleles, sex, SNP6_154, SNP6_162 |
88.2% | 88.5% | 0.746 | +Smoked, SNP11_389, SNP18_269 |
Using SNPs/SNP haplotypes nearest the underlying loci as described in the "answers" | |||
88.5% | 88.5% | 0.746 | The SNPs nearest loci A-F, sex, smoking, DR genotype |
Using the underlying loci provided in the "answers" | |||
88.7% | 90.1% | 0.773 | Number of deleterious alleles at loci A-F, sex, smoking, DR |