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Table 1 Results: Power

From: Joint linkage and association analysis for identification of potentially causal polymorphisms in GAW15 data

 

Power (%)b

SNP/marker/Haplotype/SNP seta

Li-cpg

Lamp

Sun-cpg

152

100

100

100

153

93

93

90

154

100

100

100

155

100

100

100

162

100

100

100

153, 162

--

--

100

153, 154

--

--

73

153, 154, 162

--

--

51

d3437–d3439

9

--

8

d3437–153

9

--

8

d3437–d3439, d3931

--

--

4

d3437–d3439, d3933

--

--

4

DRB1

99

100,100,100

32

  1. a"SNP set" is a set of SNPs that need not be fully linked. The SNPs in the set are separated by commas. A "haplotype" is composed of two "fully linked" SNPs. The SNPs in a haplotype are shown separated by a dash.
  2. bPower to reject the null hypothesis that association with the SNP/marker/SNP set/haplotype can explain all the linkage at a given location.