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Table 3 LOD values for the one-sided alternative of the minor allele

From: Armitage's trend test for genome-wide association analysis: one-sided or two-sided?

SNPa

Z b

Z A1 c

Z A2

Z A3

rs4078292

0.00

0.00

0.03

0.00

rs12380341

0.00

0.00

0.11

0.00

rs16929545

0.00

0.00

0.02

0.00

*rs1953126

7.86

7.83

5.35

5.74

*rs10985073

7.28

7.17

5.93

4.49

*rs881375

7.95

7.93

5.12

6.01

*rs3761847

8.21

8.05

6.22

5.33

*rs10760130

7.72

7.60

6.33

4.70

*rs2900180

8.51

8.49

5.50

6.39

rs872863

0.00

0.00

0.01

0.00

rs888229

0.00

0.00

0.02

0.00

rs11185665

0.00

0.00

0.63

0.00

rs11792145

0.00

0.00

0.27

0.00

  1. a Asterisks indicates SNPs are located on TRAF1-C5.
  2. b Z is the z-test comparing the frequencies of the minor allele in the two groups
  3. c Superscripts A1, A2 and A3 denote the test (2) with score systems 1, 2, and 3, respectively