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Table 1 SNP significantly associated with immune traits

From: Across-line SNP association study for (innate) immune and behavioral traits in laying hens

      

Complement activity

chromosome

SNP1

Kbps

cM2

Natural Abs

Acquired Abs

classical

alternative

chr 3

rs13526054 (IL17A)3

110370

275.9

+

-

+

+

 

rs15458146 (IL17A)3

110371

275.9

+

+

-

-

chr 13

rs15677371

7927

19.8

+

-

-

-

 

rs15677377

7927

19.8

+

-

-

-

 

rs14050302(IL12B)3

7917

19.8

+

-

-

-

 

rs14064896 (IRF1)3

17452

43.6

+

-

-

+

 

rs14064900 (IRF1)3

17452

43.6

-

+

+

-

chr16

snp.gga16Tapasin. 180144exon1TC (TAPBP)3

65

0.2

-

+

+

-

 

rs15788216 (MHC/BLB1)3

70

0.2

+

+

-

-

chr 26

rs14298900 (IL10)3

2375

5.9

+

-

+

-

  1. 1. SNP as present in dbSNP at NCBI (http://www.ncbi.nlm.nih.gov).
  2. 2. 1 cM = 4 · 105 bps.
  3. 3. IL17A, gene encoding interleukin 17A; HTR2C, gene encoding the serotonin receptor 2C; IL12B, gene encoding interleukin 12B; IRF1, gene encoding interferon regulatory transcription factor; MHC, gene encoding major histocompatibility complex; BLB1, gene encoding class II beta chain 1; TAPBP, gene encoding TAP binding protein; IL10, gene encoding interleukin 10.