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Table 1 Mean multiple correlation between (1) the set of common SNPs and the number of rare alleles, (2) permuted common SNPs and the number of rare alleles, (3) the set of common SNPs and the number of synonymous rare alleles, and (4) the set of common SNPs and the number of nonsynonymous rare alleles

From: Capability of common SNPs to tag rare variants

Population

(1) Common vs. rare SNPs

(2) Random correlation

t test P

Kolmogorov-Smirnov test P

(3) Common vs. synonymous rare SNPs

(4) Common vs. nonsynonymous rare SNPs

t test P

European

0.078

−0.022

2.84 × 10−9

9.66 × 10−15

0.078

0.077

0.952

Chinese

0.067

0.003

6.80 × 10−6

1.28 × 10−5

0.090

0.041

0.024

Denver Chinese

0.063

−0.002

2.30 × 10−6

3.052 × 10−10

0.085

0.064

0.350

Japanese

0.089

0.004

1.50 × 10−8

6.17 × 10−12

0.091

0.081

0.668

Luhya

0.238

−0.0006

<2.2 × 10−16

<2.2 × 10−16

0.241

0.233

0.678

Tuscan

0.063

−0.002

0.001

4.60 × 10−6

0.088

0.045

0.100

Yoruba

0.120

−0.007

<2.2 × 10−16

<2.2 × 10−16

0.142

0.099

0.008

All samples

0.053

0.054

0.580

0.118

0.057

0.048

7.74 × 10-4