From: Admixture mapping analysis in the context of GWAS with GAW18 data
Method1 | Input genotype | SNP density | Computing time (minutes)2 | Number of ancestry segments | Correlation with admixture | |
---|---|---|---|---|---|---|
 |  |  |  | Mean | SD |  |
LAMP | Unphased | Low | <1 | 6.00 | 1.78 | 0.920 |
LAMP-LD | Unphased | High | 128 | 25.49 | 7.27 | 0.989 |
MULTIMIX | Unphased | High | 20 | 22.40 | 17.5 | 0.923 |
MULTIMIX | Phased | High | 20 + 5603 | 49.13 | 18.87 | 0.975 |